SubtiBank SubtiBank
yokK [2018-11-19 18:00:44]
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yokK [2018-11-19 18:00:44]

unknown
locus
BSU21560
pI
4.10
mw
21.91 kDa
protein length
192 aa Sequence Blast
gene length
576 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,274,558 → 2,275,136

    The protein

    Protein family

  • protease prsW family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|13C081250872E72C61C49D8F77AC5AF4B6D431A3|yokI]-[gene|9BC2309D7FC93CD4195849BFCF195ED3EBC3CAF1|yokJ]-[gene|8BA8DB1483190AB847F28F3E56C247FE85C3225E|yokK]-[gene|9A03964C94A9253B3D9AAA60ACA0651AED49A627|yokL]
    description
    [Pubmed|20817675]

    regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|yolA]' and '[protein|search|yokL]' [PubMed|20525796]
    • view in new tab

    Biological materials

    Mutant

  • BKE21560 (Δ[gene|8BA8DB1483190AB847F28F3E56C247FE85C3225E|yokK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAATACCCTCCGCAT, downstream forward: _UP4_TAAGAAATCGTATGGAAATA
  • BKK21560 (Δ[gene|8BA8DB1483190AB847F28F3E56C247FE85C3225E|yokK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAATACCCTCCGCAT, downstream forward: _UP4_TAAGAAATCGTATGGAAATA

    • References

  • 20817675